Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.27□□□□□ -0.29
HOXC12P31275 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 MROH4P-201ENST00000431302 1578 ntBASIC13.27□□□□□ -0.29
HOXC12P31275 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.27□□□□□ -0.29
HOXC12P31275 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HOXC12P31275 AC022532.1-201ENST00000624563 1728 ntBASIC13.27□□□□□ -0.29
HOXC12P31275 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.27□□□□□ -0.29
HOXC12P31275 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.27□□□□□ -0.29
HOXC12P31275 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.27□□□□□ -0.29
HOXC12P31275 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HOXC12P31275 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
HOXC12P31275 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
HOXC12P31275 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HOXC12P31275 AC073347.1-201ENST00000421633 2643 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
HOXC12P31275 AP002414.2-201ENST00000591780 3365 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.26□□□□□ -0.29
HOXC12P31275 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.26□□□□□ -0.29
HOXC12P31275 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
HOXC12P31275 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.26□□□□□ -0.29
HOXC12P31275 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 Z93015.1-201ENST00000451718 390 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.26□□□□□ -0.29
HOXC12P31275 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 GNRHR2-203ENST00000581100 1187 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 AC016629.1-201ENST00000596579 586 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
HOXC12P31275 AL008638.5-201ENST00000623814 1298 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.26□□□□□ -0.29
HOXC12P31275 AL157414.3-201ENST00000624276 1954 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 PPT1-215ENST00000641471 2368 ntBASIC13.26□□□□□ -0.29
HOXC12P31275 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HOXC12P31275 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HOXC12P31275 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 OR2I1P-208ENST00000641137 4948 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms