Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.15■□□□□ 0.02
PTPN3P26045 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN3P26045 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN3P26045 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN3P26045 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN3P26045 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.15■□□□□ 0.02
PTPN3P26045 AP001002.3-201ENST00000623482 206 ntBASIC15.15■□□□□ 0.02
PTPN3P26045 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 LINC01230-201ENST00000625222 3017 ntBASIC15.15■□□□□ 0.02
PTPN3P26045 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PTPN3P26045 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN3P26045 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN3P26045 AC015688.4-201ENST00000580780 1647 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN3P26045 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN3P26045 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 COX20P2-201ENST00000452636 358 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 KRT90P-201ENST00000549264 1064 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN3P26045 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 BX088702.1-201ENST00000610784 235 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN3P26045 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 AC097376.2-205ENST00000610159 5334 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 AC152010.1-201ENST00000415779 2006 ntBASIC15.14■□□□□ 0.01
PTPN3P26045 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN3P26045 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN3P26045 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PTPN3P26045 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
PTPN3P26045 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms