Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 IGHV3-42-201ENST00000520410 361 ntBASIC13.94□□□□□ -0.18
NR4A1P22736 AC027369.6-201ENST00000525520 931 ntBASIC13.94□□□□□ -0.18
NR4A1P22736 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.94□□□□□ -0.18
NR4A1P22736 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 AL589739.1-201ENST00000607720 493 ntBASIC13.94□□□□□ -0.18
NR4A1P22736 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR4A1P22736 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.94□□□□□ -0.18
NR4A1P22736 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.94□□□□□ -0.18
NR4A1P22736 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 AL023775.1-201ENST00000454907 1746 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 AL691432.1-201ENST00000596308 1422 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.93□□□□□ -0.18
NR4A1P22736 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 BASP1P1-201ENST00000430708 665 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 AC092580.3-201ENST00000430932 139 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 HMGN1P19-201ENST00000436976 333 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NR4A1P22736 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 AC243562.2-201ENST00000561247 970 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.93□□□□□ -0.18
NR4A1P22736 AL390955.2-201ENST00000603032 514 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 AL031595.1-201ENST00000623969 4709 ntBASIC13.93□□□□□ -0.18
NR4A1P22736 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NR4A1P22736 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR4A1P22736 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.93□□□□□ -0.18
NR4A1P22736 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR4A1P22736 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR4A1P22736 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.92□□□□□ -0.18
NR4A1P22736 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.92□□□□□ -0.18
NR4A1P22736 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NR4A1P22736 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.92□□□□□ -0.18
NR4A1P22736 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.92□□□□□ -0.18
NR4A1P22736 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
NR4A1P22736 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR4A1P22736 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.92□□□□□ -0.18
NR4A1P22736 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms