Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
RFX1P22670 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RFX1P22670 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 AC068418.2-201ENST00000577309 3703 ntBASIC16.21■□□□□ 0.19
RFX1P22670 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 MIR326-201ENST00000362220 95 ntBASIC16.21■□□□□ 0.19
RFX1P22670 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 AC026954.1-201ENST00000429771 1293 ntBASIC16.21■□□□□ 0.19
RFX1P22670 AC026434.2-201ENST00000506094 1078 ntBASIC16.21■□□□□ 0.19
RFX1P22670 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.21■□□□□ 0.19
RFX1P22670 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.21■□□□□ 0.19
RFX1P22670 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.21■□□□□ 0.19
RFX1P22670 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.21■□□□□ 0.19
RFX1P22670 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RFX1P22670 AL021578.1-201ENST00000613646 709 ntBASIC16.21■□□□□ 0.19
RFX1P22670 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 AC244452.3-201ENST00000636814 210 ntBASIC16.21■□□□□ 0.19
RFX1P22670 AC007686.3-201ENST00000619017 3487 ntBASIC16.21■□□□□ 0.19
RFX1P22670 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.21■□□□□ 0.19
RFX1P22670 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFX1P22670 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.21■□□□□ 0.19
RFX1P22670 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.21■□□□□ 0.19
RFX1P22670 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFX1P22670 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFX1P22670 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFX1P22670 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFX1P22670 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFX1P22670 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFX1P22670 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RFX1P22670 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RFX1P22670 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX1P22670 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 LRRC59-203ENST00000576448 1531 ntBASIC16.2■□□□□ 0.18
RFX1P22670 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX1P22670 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX1P22670 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.2■□□□□ 0.18
RFX1P22670 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.2■□□□□ 0.18
RFX1P22670 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.2■□□□□ 0.18
RFX1P22670 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.2■□□□□ 0.18
RFX1P22670 EIF3FP3-201ENST00000434851 1086 ntBASIC16.2■□□□□ 0.18
RFX1P22670 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 AC012441.1-201ENST00000446669 685 ntBASIC16.2■□□□□ 0.18
RFX1P22670 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 Z93015.1-201ENST00000451718 390 ntBASIC16.2■□□□□ 0.18
RFX1P22670 AC104306.2-201ENST00000451877 341 ntBASIC16.2■□□□□ 0.18
RFX1P22670 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.2■□□□□ 0.18
RFX1P22670 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.2■□□□□ 0.18
RFX1P22670 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 AC022447.6-201ENST00000515522 438 ntBASIC16.2■□□□□ 0.18
RFX1P22670 KRT90P-201ENST00000549264 1064 ntBASIC16.2■□□□□ 0.18
RFX1P22670 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 C2orf69P2-201ENST00000562032 1123 ntBASIC16.2■□□□□ 0.18
RFX1P22670 AC244669.2-201ENST00000612320 853 ntBASIC16.2■□□□□ 0.18
RFX1P22670 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 OR2I1P-210ENST00000642037 4691 ntBASIC16.2■□□□□ 0.18
RFX1P22670 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFX1P22670 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX1P22670 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms