Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DPA1P20036 MRPL37P1-201ENST00000592451 1337 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPA1P20036 FAM197Y7-201ENST00000432892 766 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 AC022447.6-201ENST00000515522 438 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 AC106820.3-201ENST00000561653 397 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 AC106886.1-201ENST00000568660 600 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DPA1P20036 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPA1P20036 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPA1P20036 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HLA-DPA1P20036 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DPA1P20036 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.03■□□□□ -0
HLA-DPA1P20036 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HLA-DPA1P20036 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
HLA-DPA1P20036 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 ARSEP1-201ENST00000420443 635 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 AL590640.2-201ENST00000457038 527 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 AL391280.1-201ENST00000506969 1062 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 ALG3P1-201ENST00000508806 1114 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DPA1P20036 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HLA-DPA1P20036 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DPA1P20036 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 AC244669.2-201ENST00000612320 853 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DPA1P20036 AC138951.2-201ENST00000623455 1161 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 AC006453.4-201ENST00000636949 1252 ntBASIC15.02■□□□□ -0
HLA-DPA1P20036 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DPA1P20036 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms