Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 ACTBP8-201ENST00000403258 1108 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 BASP1P1-201ENST00000430708 665 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
COL6A2P12110 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 TMEM198B-204ENST00000484016 896 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.73□□□□□ -0.05
COL6A2P12110 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 AC093726.1-201ENST00000608064 963 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 MIR8072-201ENST00000614241 80 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 Z82170.1-201ENST00000625081 3192 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
COL6A2P12110 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
COL6A2P12110 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
COL6A2P12110 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
COL6A2P12110 AC092552.1-201ENST00000547243 906 ntBASIC14.72□□□□□ -0.05
COL6A2P12110 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.72□□□□□ -0.05
COL6A2P12110 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.72□□□□□ -0.05
COL6A2P12110 AC008761.3-201ENST00000624803 892 ntBASIC14.72□□□□□ -0.05
COL6A2P12110 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 AL139385.1-201ENST00000611744 3272 ntBASIC14.72□□□□□ -0.05
COL6A2P12110 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.72□□□□□ -0.05
COL6A2P12110 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.72□□□□□ -0.05
COL6A2P12110 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.72□□□□□ -0.05
COL6A2P12110 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL6A2P12110 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
COL6A2P12110 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.71□□□□□ -0.05
COL6A2P12110 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.71□□□□□ -0.05
COL6A2P12110 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL6A2P12110 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL6A2P12110 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms