Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC25.12■■□□□ 1.61
TOP2AP11388 PTGER4P3-201ENST00000458150 252 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 ALG1L7P-201ENST00000502317 768 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 F11R-204ENST00000537746 1245 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 CYP4F36P-201ENST00000589193 186 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC25.12■■□□□ 1.61
TOP2AP11388 RNF146-211ENST00000609447 607 ntTSL 4 BASIC25.12■■□□□ 1.61
TOP2AP11388 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 CICP6-201ENST00000457191 2729 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
TOP2AP11388 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 AC073210.1-201ENST00000414799 232 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TOP2AP11388 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
TOP2AP11388 PFN2-212ENST00000490975 858 ntTSL 4 BASIC25.12■■□□□ 1.61
TOP2AP11388 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC25.12■■□□□ 1.61
TOP2AP11388 SRP14-204ENST00000558720 780 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 AC027139.1-201ENST00000565286 951 ntBASIC25.12■■□□□ 1.61
TOP2AP11388 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC25.12■■□□□ 1.61
TOP2AP11388 AC013268.4-201ENST00000637413 2228 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TOP2AP11388 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC25.11■■□□□ 1.61
TOP2AP11388 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC25.11■■□□□ 1.61
TOP2AP11388 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 ZNF436-AS1-201ENST00000335648 2547 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC25.11■■□□□ 1.61
TOP2AP11388 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC25.11■■□□□ 1.61
TOP2AP11388 SHMT1P1-201ENST00000419974 1312 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 AC022532.1-201ENST00000624563 1728 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TOP2AP11388 BPIFB5P-201ENST00000457066 1099 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
TOP2AP11388 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 SLC25A15P3-201ENST00000505530 290 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC25.11■■□□□ 1.61
TOP2AP11388 DLK1-205ENST00000556051 469 ntTSL 2 BASIC25.11■■□□□ 1.61
TOP2AP11388 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC25.11■■□□□ 1.61
TOP2AP11388 MIR4265-201ENST00000582152 99 ntBASIC25.11■■□□□ 1.61
TOP2AP11388 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC25.11■■□□□ 1.61
TOP2AP11388 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TOP2AP11388 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC25.1■■□□□ 1.61
TOP2AP11388 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
TOP2AP11388 SARS-202ENST00000369923 1882 ntTSL 5 BASIC25.1■■□□□ 1.61
TOP2AP11388 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC25.1■■□□□ 1.61
TOP2AP11388 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC25.1■■□□□ 1.61
TOP2AP11388 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
TOP2AP11388 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TOP2AP11388 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 RBM4-207ENST00000506523 654 ntTSL 3 BASIC25.1■■□□□ 1.61
TOP2AP11388 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC25.1■■□□□ 1.61
TOP2AP11388 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC25.1■■□□□ 1.61
TOP2AP11388 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC25.1■■□□□ 1.61
TOP2AP11388 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC25.1■■□□□ 1.61
TOP2AP11388 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TOP2AP11388 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC25.09■■□□□ 1.61
TOP2AP11388 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TOP2AP11388 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TOP2AP11388 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC25.09■■□□□ 1.61
TOP2AP11388 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC25.09■■□□□ 1.61
TOP2AP11388 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC25.09■■□□□ 1.61
TOP2AP11388 STK24P1-201ENST00000455035 1291 ntBASIC25.09■■□□□ 1.61
TOP2AP11388 ALG1L3P-201ENST00000503331 765 ntBASIC25.09■■□□□ 1.61
TOP2AP11388 PRSS3P1-201ENST00000503996 742 ntBASIC25.09■■□□□ 1.61
TOP2AP11388 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC25.09■■□□□ 1.61
TOP2AP11388 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms