Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TOP1P11387 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP1P11387 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP1P11387 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TOP1P11387 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.47■□□□□ 0.39
TOP1P11387 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TOP1P11387 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.47■□□□□ 0.39
TOP1P11387 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AC100850.1-201ENST00000506768 649 ntBASIC17.47■□□□□ 0.39
TOP1P11387 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TOP1P11387 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.47■□□□□ 0.39
TOP1P11387 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP1P11387 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.47■□□□□ 0.39
TOP1P11387 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.47■□□□□ 0.39
TOP1P11387 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AC005695.3-201ENST00000614522 232 ntBASIC17.47■□□□□ 0.39
TOP1P11387 AL096828.3-201ENST00000615354 462 ntBASIC17.47■□□□□ 0.39
TOP1P11387 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AC232323.1-201ENST00000540724 2099 ntBASIC17.47■□□□□ 0.39
TOP1P11387 LINC00528-201ENST00000600723 2160 ntBASIC17.47■□□□□ 0.39
TOP1P11387 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 LINC00552-201ENST00000625151 2579 ntBASIC17.47■□□□□ 0.39
TOP1P11387 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP1P11387 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TOP1P11387 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP1P11387 AL390755.1-201ENST00000623716 2027 ntBASIC17.47■□□□□ 0.39
TOP1P11387 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TOP1P11387 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TOP1P11387 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TOP1P11387 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.46■□□□□ 0.39
TOP1P11387 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.46■□□□□ 0.39
TOP1P11387 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.46■□□□□ 0.39
TOP1P11387 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.46■□□□□ 0.39
TOP1P11387 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.46■□□□□ 0.39
TOP1P11387 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TOP1P11387 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP1P11387 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP1P11387 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TOP1P11387 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms