Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 AC006504.5-208ENST00000588784 2401 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 CD8B2-202ENST00000417670 633 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.49□□□□□ -0.25
FREM3P0C091 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.49□□□□□ -0.25
FREM3P0C091 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.49□□□□□ -0.25
FREM3P0C091 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.49□□□□□ -0.25
FREM3P0C091 NDUFV2P1-201ENST00000596415 907 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AP001002.3-201ENST00000623482 206 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AL360270.3-201ENST00000609118 1348 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
FREM3P0C091 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AC007191.1-201ENST00000623179 2995 ntBASIC13.48□□□□□ -0.25
FREM3P0C091 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 AC244394.1-201ENST00000435000 1665 ntBASIC13.48□□□□□ -0.25
FREM3P0C091 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.48□□□□□ -0.25
FREM3P0C091 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 AL022328.3-201ENST00000607943 679 ntBASIC13.48□□□□□ -0.25
FREM3P0C091 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.48□□□□□ -0.25
FREM3P0C091 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 SALL4P5-201ENST00000419001 1760 ntBASIC13.48□□□□□ -0.25
FREM3P0C091 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.48□□□□□ -0.25
FREM3P0C091 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.48□□□□□ -0.25
FREM3P0C091 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.48□□□□□ -0.25
FREM3P0C091 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.48□□□□□ -0.25
FREM3P0C091 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
FREM3P0C091 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
FREM3P0C091 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FREM3P0C091 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.47□□□□□ -0.25
FREM3P0C091 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 SHC1P1-201ENST00000425230 1745 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.47□□□□□ -0.25
FREM3P0C091 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
FREM3P0C091 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.47□□□□□ -0.25
FREM3P0C091 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
FREM3P0C091 POM121L10P-201ENST00000436994 1285 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 RNMTL1P1-201ENST00000454103 560 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
FREM3P0C091 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.47□□□□□ -0.25
FREM3P0C091 AC068587.8-201ENST00000641239 219 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.47□□□□□ -0.25
FREM3P0C091 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FREM3P0C091 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.47□□□□□ -0.25
FREM3P0C091 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
FREM3P0C091 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.47□□□□□ -0.25
FREM3P0C091 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FREM3P0C091 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms