Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL139010.1-201ENST00000454878 894 ntBASIC11.57□□□□□ -0.56
CXCL1P09341 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.57□□□□□ -0.56
CXCL1P09341 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.57□□□□□ -0.56
CXCL1P09341 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 AC026979.3-201ENST00000607315 403 ntBASIC11.57□□□□□ -0.56
CXCL1P09341 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.57□□□□□ -0.56
CXCL1P09341 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 NCLP1-201ENST00000445357 1963 ntBASIC11.57□□□□□ -0.56
CXCL1P09341 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CXCL1P09341 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CXCL1P09341 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CXCL1P09341 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.57□□□□□ -0.56
CXCL1P09341 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CXCL1P09341 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 AC136604.1-201ENST00000418535 575 ntBASIC11.56□□□□□ -0.56
CXCL1P09341 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.56□□□□□ -0.56
CXCL1P09341 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.56□□□□□ -0.56
CXCL1P09341 AC009947.1-201ENST00000444350 727 ntBASIC11.56□□□□□ -0.56
CXCL1P09341 AC092910.1-201ENST00000482027 1129 ntBASIC11.56□□□□□ -0.56
CXCL1P09341 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.56□□□□□ -0.56
CXCL1P09341 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 HNRNPUP1-201ENST00000554987 333 ntBASIC11.56□□□□□ -0.56
CXCL1P09341 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 AC097359.3-201ENST00000603982 1210 ntBASIC11.56□□□□□ -0.56
CXCL1P09341 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CXCL1P09341 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.56□□□□□ -0.56
CXCL1P09341 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CXCL1P09341 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CXCL1P09341 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms