Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC9.17□□□□□ -0.94
PKHD1P08F94 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC9.17□□□□□ -0.94
PKHD1P08F94 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 RN7SL121P-201ENST00000584223 273 ntBASIC9.17□□□□□ -0.94
PKHD1P08F94 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 PCDHA1-201ENST00000378133 2726 ntBASIC9.17□□□□□ -0.94
PKHD1P08F94 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC9.17□□□□□ -0.94
PKHD1P08F94 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC9.17□□□□□ -0.94
PKHD1P08F94 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PKHD1P08F94 AC092910.2-201ENST00000491262 348 ntBASIC9.17□□□□□ -0.94
PKHD1P08F94 URB1-AS1-201ENST00000534991 831 ntBASIC9.17□□□□□ -0.94
PKHD1P08F94 BATF-202ENST00000555504 361 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 AC023024.2-201ENST00000623561 1993 ntBASIC9.17□□□□□ -0.94
PKHD1P08F94 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PKHD1P08F94 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PKHD1P08F94 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.17□□□□□ -0.94
PKHD1P08F94 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 OR7E12P-201ENST00000344740 973 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 AC073869.2-201ENST00000417338 1026 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 AL080243.1-201ENST00000423293 1060 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 ST13P19-201ENST00000442505 1124 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 HPX-213ENST00000615166 826 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.16□□□□□ -0.94
PKHD1P08F94 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 KRT8P43-201ENST00000406052 1458 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 PSAT1P2-201ENST00000426107 972 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 RN7SL440P-201ENST00000577855 343 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC9.16□□□□□ -0.94
PKHD1P08F94 AC106782.5-201ENST00000616011 337 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 AC092135.3-201ENST00000624151 1846 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 AC099398.1-201ENST00000567919 2776 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 RNASEH2CP1-201ENST00000454281 502 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.16□□□□□ -0.94
PKHD1P08F94 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
PKHD1P08F94 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 AL365181.1-201ENST00000564032 1828 ntBASIC9.16□□□□□ -0.94
PKHD1P08F94 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC9.16□□□□□ -0.94
PKHD1P08F94 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PKHD1P08F94 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.16□□□□□ -0.94
PKHD1P08F94 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PKHD1P08F94 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PKHD1P08F94 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms