Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC093525.8-201ENST00000624099 1342 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 NUS1P3-201ENST00000423502 862 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC026410.3-201ENST00000514280 936 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC093813.1-201ENST00000605066 256 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AL391069.4-201ENST00000609583 481 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 BX539320.1-201ENST00000623759 877 ntBASIC13.44□□□□□ -0.26
HLA-DQA2P01906 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DQA2P01906 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 AP001267.2-201ENST00000532619 2086 ntBASIC13.43□□□□□ -0.26
HLA-DQA2P01906 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DQA2P01906 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms