Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 AC006011.2-201ENST00000621313 1158 ntBASIC12.95□□□□□ -0.34
UPK1BO75841 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 AC022400.8-201ENST00000623453 3599 ntBASIC12.95□□□□□ -0.34
UPK1BO75841 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 AL021155.1-201ENST00000438808 2637 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 KRT8P35-201ENST00000483942 1338 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 AL360270.3-201ENST00000609118 1348 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 GHET1-201ENST00000627071 1906 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK1BO75841 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK1BO75841 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK1BO75841 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 AC025062.2-201ENST00000605477 670 ntBASIC12.94□□□□□ -0.34
UPK1BO75841 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
UPK1BO75841 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK1BO75841 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UPK1BO75841 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK1BO75841 AP003969.2-201ENST00000623739 2275 ntBASIC12.93□□□□□ -0.34
UPK1BO75841 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 PI4KAP2-201ENST00000360806 2080 ntBASIC12.93□□□□□ -0.34
UPK1BO75841 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 FOXO1B-201ENST00000504678 1527 ntBASIC12.93□□□□□ -0.34
UPK1BO75841 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms