Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 AC004945.1-201ENST00000416738 983 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 RPL13AP25-201ENST00000484130 612 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 AC079316.1-201ENST00000548397 411 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 AC010328.2-201ENST00000597698 1111 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 AL049840.4-201ENST00000602422 811 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.62■□□□□ 0.09
OPHN1O60890 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
OPHN1O60890 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
OPHN1O60890 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 AL645937.2-201ENST00000396808 931 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 SOCS2P1-201ENST00000417727 557 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 AC134915.1-201ENST00000426461 574 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 AC007551.1-201ENST00000457394 519 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 BRI3BPP1-201ENST00000594224 787 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.61■□□□□ 0.09
OPHN1O60890 AC107373.2-201ENST00000607735 490 ntBASIC15.61■□□□□ 0.09
OPHN1O60890 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.61■□□□□ 0.09
OPHN1O60890 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
OPHN1O60890 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.61■□□□□ 0.09
OPHN1O60890 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.61■□□□□ 0.09
OPHN1O60890 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
OPHN1O60890 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 AL138799.1-201ENST00000448213 1675 ntBASIC15.6■□□□□ 0.09
OPHN1O60890 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
OPHN1O60890 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.6■□□□□ 0.09
OPHN1O60890 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
OPHN1O60890 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms