Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 BX640514.1-201ENST00000583223 1918 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 AC009093.2-202ENST00000620513 2079 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CROCCP4-201ENST00000457096 498 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AGGF1P1-201ENST00000509500 2073 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC106886.1-201ENST00000568660 600 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 MRPL37P1-201ENST00000592451 1337 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AL009178.2-201ENST00000597278 2719 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 AC006453.4-201ENST00000636949 1252 ntBASIC13.26□□□□□ -0.29
TRAF3IP2O43734 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF3IP2O43734 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.25□□□□□ -0.29
TRAF3IP2O43734 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AC015802.1-201ENST00000588104 1449 ntBASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 FAM8A4P-201ENST00000435433 1213 ntBASIC13.25□□□□□ -0.29
TRAF3IP2O43734 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 OR10B1P-201ENST00000601666 907 ntBASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms