Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA3F8WFD2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA3F8WFD2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.58□□□□□ -0.23
NPIPA3F8WFD2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 FTLP10-202ENST00000505798 471 ntBASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC004466.1-201ENST00000599515 1080 ntBASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC073413.1-201ENST00000603927 732 ntBASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ZACNP1-201ENST00000612259 710 ntBASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 CLUHP2-201ENST00000426660 1303 ntBASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA3F8WFD2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 MIR663B-201ENST00000408361 115 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 HSPB1P2-201ENST00000448722 546 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AC004898.1-201ENST00000451057 766 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AC106820.3-201ENST00000561653 397 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 AC138466.3-201ENST00000619983 221 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 ACE3P-201ENST00000423435 1973 ntBASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms