Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
COLCA2A8K830 ABHD17AP1-201ENST00000358206 933 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 MIR638-201ENST00000385237 100 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 STARP1-201ENST00000397973 869 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 MAP2K4P1-201ENST00000438453 1195 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 DUSP5P1-201ENST00000441325 1139 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 AC074044.1-201ENST00000609673 707 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 ABCD1P2-201ENST00000429313 1601 ntBASIC11.34□□□□□ -0.59
COLCA2A8K830 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC11.34□□□□□ -0.59
COLCA2A8K830 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC11.34□□□□□ -0.59
COLCA2A8K830 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
COLCA2A8K830 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
COLCA2A8K830 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
COLCA2A8K830 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.33□□□□□ -0.59
COLCA2A8K830 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AC002350.2-201ENST00000623894 1828 ntBASIC11.33□□□□□ -0.6
COLCA2A8K830 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.33□□□□□ -0.6
COLCA2A8K830 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AC113410.3-201ENST00000623366 203 ntBASIC11.33□□□□□ -0.6
COLCA2A8K830 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC11.33□□□□□ -0.6
COLCA2A8K830 PMS2P7-201ENST00000506558 1336 ntBASIC11.33□□□□□ -0.6
COLCA2A8K830 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.33□□□□□ -0.6
COLCA2A8K830 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 AL031432.4-201ENST00000641729 2190 ntBASIC11.33□□□□□ -0.6
COLCA2A8K830 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
COLCA2A8K830 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms