Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 TLE1P1-201ENST00000422965 589 ntBASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC093520.2-201ENST00000561830 333 ntBASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AC015688.4-201ENST00000580780 1647 ntBASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 AL365181.3-201ENST00000605886 3222 ntBASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV3S1A0A5B6 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SALL4P5-201ENST00000419001 1760 ntBASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AL627223.1-201ENST00000416693 442 ntBASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AC040169.1-201ENST00000565382 521 ntBASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AL109936.8-201ENST00000641772 604 ntBASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV3S1A0A5B6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 MRPL37P1-201ENST00000592451 1337 ntBASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms