Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 NUS1P3-201ENST00000423502 862 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 C2orf27AP3-201ENST00000434123 579 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AL355994.2-201ENST00000447882 704 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 FTH1P14-201ENST00000482930 551 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 KRT18P25-201ENST00000508931 1278 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AL354718.3-201ENST00000616414 581 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 CR382287.1-201ENST00000623954 586 ntBASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGB6Q9Y5F9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AC136759.1-202ENST00000530858 2194 ntBASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AC099336.1-201ENST00000417053 1171 ntBASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CNN2P8-201ENST00000421872 913 ntBASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHGB6Q9Y5F9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGB6Q9Y5F9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms