Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 TPM3P8-201ENST00000330554 643 ntBASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 PPY2P-201ENST00000582808 702 ntBASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AL805961.1-201ENST00000642026 753 ntBASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 AC232323.1-201ENST00000540724 2099 ntBASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS5Q9UPZ3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AC010234.1-201ENST00000494599 870 ntBASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 IGLV3-15-201ENST00000518356 244 ntBASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS5Q9UPZ3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS5Q9UPZ3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HPS5Q9UPZ3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HPS5Q9UPZ3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
HPS5Q9UPZ3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS5Q9UPZ3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 AC092171.5-201ENST00000608012 942 ntBASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms