Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CNN2P10-201ENST00000443067 918 ntBASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 LINC00528-201ENST00000600723 2160 ntBASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NPIPA1Q9UND3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NPIPA1Q9UND3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
NPIPA1Q9UND3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NPIPA1Q9UND3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NPIPA1Q9UND3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NPIPA1Q9UND3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 COX5BP1-201ENST00000507622 393 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AC022616.1-201ENST00000518688 554 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL096828.3-201ENST00000615354 462 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 LINC01101-201ENST00000622953 1884 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AC244452.3-201ENST00000636814 210 ntBASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA1Q9UND3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms