Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 AC021305.1-201ENST00000520656 1514 ntBASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 AC006372.4-201ENST00000624122 1543 ntBASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF3Q9ULT6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 AL591471.1-201ENST00000621855 229 ntBASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 AC009145.4-201ENST00000625119 1294 ntBASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
ZNRF3Q9ULT6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 OR8T1P-201ENST00000421347 918 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC092580.1-201ENST00000433998 658 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC012158.2-201ENST00000536546 354 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AL118516.1-201ENST00000564152 670 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 SIGLEC22P-201ENST00000599104 714 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AP001527.2-201ENST00000614441 631 ntBASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF3Q9ULT6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A21P-201ENST00000510875 1396 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A15P-201ENST00000514465 1395 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A6P-201ENST00000515148 1394 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A16P-201ENST00000526662 1395 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A9P-201ENST00000527940 1395 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A5P-201ENST00000528738 1395 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A14P-201ENST00000530386 1395 ntBASIC17.53■□□□□ 0.4
ZNRF3Q9ULT6 FAM90A13P-201ENST00000534703 1395 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms