Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 SIGLEC18P-201ENST00000602271 909 ntBASIC14.71□□□□□ -0.05
NCDNQ9UBB6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NCDNQ9UBB6 AC136759.1-202ENST00000530858 2194 ntBASIC14.71□□□□□ -0.05
NCDNQ9UBB6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
NCDNQ9UBB6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.71□□□□□ -0.06
NCDNQ9UBB6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NCDNQ9UBB6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NCDNQ9UBB6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.71□□□□□ -0.06
NCDNQ9UBB6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC015909.3-201ENST00000572855 1794 ntBASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 DUTP3-201ENST00000450025 415 ntBASIC14.7□□□□□ -0.06
NCDNQ9UBB6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC026410.1-201ENST00000507366 1101 ntBASIC14.7□□□□□ -0.06
NCDNQ9UBB6 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 DUX4L47-201ENST00000566374 394 ntBASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 MEG3_2.1-201ENST00000611456 105 ntBASIC14.7□□□□□ -0.06
NCDNQ9UBB6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NCDNQ9UBB6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 AC104640.1-201ENST00000562617 2109 ntBASIC14.69□□□□□ -0.06
NCDNQ9UBB6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NCDNQ9UBB6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 334.6 ms