Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 AC003102.2-201ENST00000589195 1469 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 AC138035.3-201ENST00000622706 2791 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TUBB8P8-201ENST00000458717 1058 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 AC005740.2-201ENST00000511085 419 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 AC044849.1-201ENST00000519737 1188 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 AC138649.2-201ENST00000615886 705 ntBASIC13.67□□□□□ -0.22
LRFN1Q9P244 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRFN1Q9P244 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.67□□□□□ -0.22
LRFN1Q9P244 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 NKAIN1P1-201ENST00000435754 582 ntBASIC13.66□□□□□ -0.22
LRFN1Q9P244 RNMTL1P1-201ENST00000454103 560 ntBASIC13.66□□□□□ -0.22
LRFN1Q9P244 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 AC106794.1-201ENST00000506935 792 ntBASIC13.66□□□□□ -0.22
LRFN1Q9P244 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ACTG1P17-201ENST00000558391 1119 ntBASIC13.66□□□□□ -0.22
LRFN1Q9P244 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRFN1Q9P244 PPT1-215ENST00000641471 2368 ntBASIC13.66□□□□□ -0.22
LRFN1Q9P244 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRFN1Q9P244 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms