Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 AC239868.1-201ENST00000369385 493 ntBASIC16.64■□□□□ 0.25
COL20A1Q9P218 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 RTN3P1-201ENST00000536295 711 ntBASIC16.64■□□□□ 0.25
COL20A1Q9P218 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 AC242376.1-201ENST00000559033 726 ntBASIC16.64■□□□□ 0.25
COL20A1Q9P218 MIR4754-201ENST00000582477 89 ntBASIC16.64■□□□□ 0.25
COL20A1Q9P218 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 FGD5P1-202ENST00000614866 2498 ntBASIC16.64■□□□□ 0.25
COL20A1Q9P218 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.64■□□□□ 0.25
COL20A1Q9P218 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AC006335.1-201ENST00000445200 547 ntBASIC16.63■□□□□ 0.25
COL20A1Q9P218 CEP164P1-201ENST00000455142 418 ntBASIC16.63■□□□□ 0.25
COL20A1Q9P218 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 AP002414.2-201ENST00000591780 3365 ntBASIC16.63■□□□□ 0.25
COL20A1Q9P218 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL20A1Q9P218 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
COL20A1Q9P218 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms