Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 RNU1-114P-201ENST00000365297 166 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC004066.1-201ENST00000502488 802 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 MIR6799-201ENST00000620297 69 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AL158070.2-201ENST00000623713 1621 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 AC007787.1-201ENST00000588095 1583 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 DGCR9-201ENST00000609630 2415 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREM2Q9NZC2 REXO1L5P-201ENST00000622260 2098 ntBASIC12.97□□□□□ -0.33
TREM2Q9NZC2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AJ011931.1-201ENST00000618749 2492 ntBASIC12.96□□□□□ -0.33
TREM2Q9NZC2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 BNIP3P42-201ENST00000454982 569 ntBASIC12.96□□□□□ -0.33
TREM2Q9NZC2 FTH1P14-201ENST00000482930 551 ntBASIC12.96□□□□□ -0.33
TREM2Q9NZC2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 BNIP3P29-201ENST00000598302 571 ntBASIC12.96□□□□□ -0.33
TREM2Q9NZC2 AC011447.5-201ENST00000616168 564 ntBASIC12.96□□□□□ -0.33
TREM2Q9NZC2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TREM2Q9NZC2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.96□□□□□ -0.34
TREM2Q9NZC2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TREM2Q9NZC2 ACE3P-201ENST00000423435 1973 ntBASIC12.96□□□□□ -0.34
TREM2Q9NZC2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms