Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 AL928921.2-201ENST00000641325 2442 ntBASIC12.45□□□□□ -0.42
LIN7CQ9NUP9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 SLC7A15P-201ENST00000424028 1363 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC104581.4-201ENST00000623126 3052 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AL589987.1-201ENST00000453380 819 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC023310.3-201ENST00000557027 670 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC100756.1-201ENST00000562736 682 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC138749.3-201ENST00000567691 622 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC116165.1-201ENST00000611806 668 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 AC007541.1-201ENST00000570282 1469 ntBASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIN7CQ9NUP9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms