Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 BTBD6P1-201ENST00000412176 1267 ntBASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 PPY2P-201ENST00000582808 702 ntBASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 AC073413.1-201ENST00000603927 732 ntBASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 AC091271.1-201ENST00000611877 1162 ntBASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF304Q9HCX3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF304Q9HCX3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 KRT8P4-201ENST00000509735 1454 ntBASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 MIR326-201ENST00000362220 95 ntBASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 FAM86HP-204ENST00000513466 959 ntBASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 MIR4538-201ENST00000581377 78 ntBASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 AC015818.8-201ENST00000587907 1519 ntBASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF304Q9HCX3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF304Q9HCX3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF304Q9HCX3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ZNF304Q9HCX3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF304Q9HCX3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF304Q9HCX3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms