Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC098850.1-201ENST00000419919 790 ntBASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 MYCLP2-201ENST00000449268 967 ntBASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC138696.2-201ENST00000607376 223 ntBASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM38AQ9H6F2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM38AQ9H6F2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC011498.7-201ENST00000624986 2027 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC139712.1-201ENST00000378256 1875 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC087499.6-201ENST00000411576 835 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC022137.2-201ENST00000503482 481 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 RNA5SP421-201ENST00000516864 134 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CLUHP6-201ENST00000580789 941 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 BX088702.1-201ENST00000610784 235 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms