Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 VDAC1P7-201ENST00000462417 847 ntBASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 TPRX2P-201ENST00000535362 881 ntBASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AL354702.1-201ENST00000442006 1960 ntBASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.83□□□□□ -0.2
POLR2J2Q9GZM3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 TLE1P1-201ENST00000422965 589 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC114812.1-204ENST00000449669 728 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 DOC2GP-202ENST00000514950 1163 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC022616.1-201ENST00000518688 554 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 DUX4L27-201ENST00000554796 1261 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AL390754.1-201ENST00000619088 582 ntBASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms