Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AP000593.2-201ENST00000542775 1433 ntBASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CICP14-201ENST00000629111 2732 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TUBBP5-203ENST00000508529 1334 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SHC1P1-201ENST00000425230 1745 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AL136309.1-201ENST00000403917 691 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC16A6P1-201ENST00000413214 1059 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MTATP6P19-201ENST00000413797 659 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 POM121L10P-201ENST00000436994 1285 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 VDAC1P1-201ENST00000439229 848 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CICP12-201ENST00000455801 843 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC012618.1-201ENST00000461223 412 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MTND2P7-201ENST00000521337 640 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms