Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC015909.5-201ENST00000624336 2266 ntBASIC14.54□□□□□ -0.08
EBF4Q9BQW3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EBF4Q9BQW3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC215219.1-201ENST00000400706 1817 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC044860.1-202ENST00000559481 777 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC004241.5-201ENST00000623870 2448 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC083964.2-201ENST00000623988 2396 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AL157996.1-201ENST00000624684 2299 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AC068760.1-201ENST00000493579 1953 ntBASIC14.53□□□□□ -0.08
EBF4Q9BQW3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 CLK3P2-201ENST00000427566 1453 ntBASIC14.52□□□□□ -0.08
EBF4Q9BQW3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
EBF4Q9BQW3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms