Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.27□□□□□ -0.29
VRK1Q99986 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 AL022328.1-201ENST00000610050 478 ntBASIC13.27□□□□□ -0.29
VRK1Q99986 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 AC133552.6-201ENST00000613406 534 ntBASIC13.27□□□□□ -0.29
VRK1Q99986 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.27□□□□□ -0.29
VRK1Q99986 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
VRK1Q99986 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VRK1Q99986 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.27□□□□□ -0.29
VRK1Q99986 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 AL133267.1-201ENST00000398220 340 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 BOLA2P3-201ENST00000404566 256 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 BCRP2-202ENST00000447763 634 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 AC022210.1-201ENST00000449856 793 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 BCRP6-201ENST00000510112 632 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 BCRP7-201ENST00000511549 544 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VRK1Q99986 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 AC124283.3-201ENST00000570869 594 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 MIR5189-201ENST00000577370 114 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 MIR4313-201ENST00000580760 101 ntBASIC13.26□□□□□ -0.29
VRK1Q99986 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.26□□□□□ -0.29
VRK1Q99986 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms