Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AKR1C7P-201ENST00000305623 895 ntBASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 AC021087.4-201ENST00000563761 564 ntBASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 AC074044.1-201ENST00000609673 707 ntBASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3IPQ96QF0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 UNC93B7-201ENST00000509439 705 ntBASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 AC105233.2-201ENST00000523697 349 ntBASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 AF228730.5-201ENST00000530288 346 ntBASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3IPQ96QF0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AC015910.1-201ENST00000579400 975 ntBASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 AC005593.1-201ENST00000624894 515 ntBASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IPQ96QF0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms