Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 RN7SKP214-201ENST00000364208 315 ntBASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ISCA2P1-201ENST00000425548 448 ntBASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 AC079336.7-201ENST00000623428 1078 ntBASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 AC100757.4-201ENST00000626934 759 ntBASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ZBED1P1-201ENST00000502364 1930 ntBASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC85AQ96PX6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AL008707.1-201ENST00000422498 534 ntBASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AC103988.2-201ENST00000561804 725 ntBASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AC008825.2-201ENST00000603374 718 ntBASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AGAP7P-201ENST00000582299 2062 ntBASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AGAP14-201ENST00000624701 2060 ntBASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
CCDC85AQ96PX6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 ELK2AP-201ENST00000392510 1007 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 HINT2P1-201ENST00000419438 481 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AL157407.1-201ENST00000435784 904 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AL645933.1-201ENST00000440087 609 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AC073150.1-201ENST00000450406 1084 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AC090857.1-201ENST00000527400 390 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AL132994.2-201ENST00000603120 687 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 BX088702.1-201ENST00000610784 235 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 CYP4F23P-201ENST00000593402 1579 ntBASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC85AQ96PX6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms