Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 GOLGA2P7-209ENST00000560408 745 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 SIGLEC22P-201ENST00000599104 714 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 LINC00244-201ENST00000625073 613 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 KRT18P46-201ENST00000435568 1279 ntBASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 MIR5001-201ENST00000580185 100 ntBASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 MIR6746-201ENST00000620971 63 ntBASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM43Q96BQ3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SSR4P1-203ENST00000599569 2260 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AC026470.1-201ENST00000478038 846 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AC010976.2-201ENST00000609697 852 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AC006483.2-201ENST00000609813 515 ntBASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms