Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC016629.1-201ENST00000596579 586 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AL645939.5-201ENST00000606834 243 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC091812.3-201ENST00000621362 345 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AL162426.1-201ENST00000624141 743 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC006058.4-201ENST00000624016 1670 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC004899.1-201ENST00000424687 1714 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC007292.2-201ENST00000593524 1812 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AJ011931.1-201ENST00000618749 2492 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AC011742.3-201ENST00000439053 820 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 PUDPP3-201ENST00000445368 636 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AC104073.2-201ENST00000453737 312 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 IMP3P2-201ENST00000489760 475 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 RN7SL190P-201ENST00000582519 257 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 CICP23-201ENST00000605013 2741 ntBASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6V0A1Q93050 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 DUX4L46-201ENST00000566845 751 ntBASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms