Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 AC004066.1-201ENST00000502488 802 ntBASIC14.13□□□□□ -0.15
TM9SF4Q92544 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 MIR4741-201ENST00000579822 90 ntBASIC14.13□□□□□ -0.15
TM9SF4Q92544 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 AC117489.1-201ENST00000625169 3217 ntBASIC14.13□□□□□ -0.15
TM9SF4Q92544 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ZBED1P1-201ENST00000502364 1930 ntBASIC14.12□□□□□ -0.15
TM9SF4Q92544 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.12□□□□□ -0.15
TM9SF4Q92544 AC004898.1-201ENST00000451057 766 ntBASIC14.12□□□□□ -0.15
TM9SF4Q92544 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.12□□□□□ -0.15
TM9SF4Q92544 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AL008638.5-201ENST00000623814 1298 ntBASIC14.12□□□□□ -0.15
TM9SF4Q92544 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
TM9SF4Q92544 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM9SF4Q92544 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 AL365209.1-201ENST00000624418 6473 ntBASIC14.11□□□□□ -0.15
TM9SF4Q92544 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TM9SF4Q92544 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms