Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHC3Q92529 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHC3Q92529 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SHC3Q92529 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHC3Q92529 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SHC3Q92529 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC3Q92529 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHC3Q92529 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.81■□□□□ 0.12
SHC3Q92529 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.81■□□□□ 0.12
SHC3Q92529 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 AL354989.2-201ENST00000435838 1540 ntBASIC15.81■□□□□ 0.12
SHC3Q92529 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 KRT17P7-201ENST00000451704 1104 ntBASIC15.81■□□□□ 0.12
SHC3Q92529 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 COX5BP1-201ENST00000507622 393 ntBASIC15.81■□□□□ 0.12
SHC3Q92529 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.81■□□□□ 0.12
SHC3Q92529 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.81■□□□□ 0.12
SHC3Q92529 C2orf69P2-201ENST00000562032 1123 ntBASIC15.81■□□□□ 0.12
SHC3Q92529 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC3Q92529 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHC3Q92529 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC3Q92529 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 KRT8P28-201ENST00000433288 1390 ntBASIC15.8■□□□□ 0.12
SHC3Q92529 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 AL136309.1-201ENST00000403917 691 ntBASIC15.8■□□□□ 0.12
SHC3Q92529 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.8■□□□□ 0.12
SHC3Q92529 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.8■□□□□ 0.12
SHC3Q92529 AC106886.1-201ENST00000568660 600 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms