Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SLC38A9Q8NBW4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC38A9Q8NBW4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC38A9Q8NBW4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AGAP7P-201ENST00000582299 2062 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AGAP14-201ENST00000624701 2060 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AL157407.1-201ENST00000435784 904 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC012618.1-201ENST00000461223 412 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC009779.1-201ENST00000551138 283 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AL132994.2-201ENST00000603120 687 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AF254983.2-201ENST00000612331 135 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LINC00528-201ENST00000600723 2160 ntBASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SLC38A9Q8NBW4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AL157791.1-201ENST00000553667 1699 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 RN7SKP214-201ENST00000364208 315 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AL133466.1-201ENST00000447582 150 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 RN7SL720P-201ENST00000488178 304 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC079328.1-201ENST00000560358 952 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC016629.1-201ENST00000596579 586 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AC009884.2-201ENST00000603110 324 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AP000346.4-201ENST00000614827 381 ntBASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms