Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLX4Q8IY92 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 AL357373.1-201ENST00000394974 322 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 LINC00265-2P-201ENST00000413372 782 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 AC006987.1-201ENST00000413610 527 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 STK24P1-201ENST00000455035 1291 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 BPIFB5P-201ENST00000457066 1099 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 CHCHD2P2-201ENST00000503744 321 ntBASIC17.58■□□□□ 0.41
SLX4Q8IY92 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLX4Q8IY92 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLX4Q8IY92 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.58■□□□□ 0.41
SLX4Q8IY92 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLX4Q8IY92 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLX4Q8IY92 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLX4Q8IY92 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ENPP7P8-202ENST00000527856 1345 ntBASIC17.58■□□□□ 0.4
SLX4Q8IY92 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 GEMIN8P4-201ENST00000380526 729 ntBASIC17.58■□□□□ 0.4
SLX4Q8IY92 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 HLA-DPA2-205ENST00000433582 733 ntBASIC17.58■□□□□ 0.4
SLX4Q8IY92 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 VENTXP3-201ENST00000546480 773 ntBASIC17.58■□□□□ 0.4
SLX4Q8IY92 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLX4Q8IY92 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
SLX4Q8IY92 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 AC117503.4-201ENST00000623229 1418 ntBASIC17.57■□□□□ 0.4
SLX4Q8IY92 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 OR52M2P-201ENST00000414298 959 ntBASIC17.57■□□□□ 0.4
SLX4Q8IY92 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 RPL3P5-201ENST00000441645 1232 ntBASIC17.57■□□□□ 0.4
SLX4Q8IY92 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.57■□□□□ 0.4
SLX4Q8IY92 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLX4Q8IY92 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms