Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRIM48Q8IWZ4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AP000845.1-201ENST00000581677 2131 ntBASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 ACTBP11-201ENST00000436287 1126 ntBASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AC091271.1-201ENST00000611877 1162 ntBASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AC138466.3-201ENST00000619983 221 ntBASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM48Q8IWZ4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 CLUHP2-201ENST00000426660 1303 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 AC023908.3-201ENST00000564211 3047 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 CNN2P10-201ENST00000443067 918 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 AL391280.1-201ENST00000506969 1062 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 EEF1DP1-201ENST00000585891 896 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms