Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MIR574-201ENST00000385209 96 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 DNAJB3-201ENST00000446806 729 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 GAPDHP40-201ENST00000505218 1006 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TIMM17BP1-201ENST00000545713 516 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC105206.1-202ENST00000314927 2368 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TCAM1P-207ENST00000485295 1537 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 TUBB3P1-201ENST00000405796 1332 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC093525.8-201ENST00000624099 1342 ntBASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NUDCD3Q8IVD9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 AC020910.6-201ENST00000623084 1459 ntBASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUDCD3Q8IVD9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms