Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AC004522.1-201ENST00000419978 654 ntBASIC18.26■□□□□ 0.51
COL23A1Q86Y22 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AC068831.5-201ENST00000557387 328 ntBASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AL133467.4-201ENST00000602953 725 ntBASIC18.26■□□□□ 0.51
COL23A1Q86Y22 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 WASH3P-207ENST00000560956 1394 ntBASIC18.26■□□□□ 0.51
COL23A1Q86Y22 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL23A1Q86Y22 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 AC004686.1-201ENST00000605113 538 ntBASIC18.25■□□□□ 0.51
COL23A1Q86Y22 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 AL109809.1-201ENST00000418979 1367 ntBASIC18.25■□□□□ 0.51
COL23A1Q86Y22 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.25■□□□□ 0.51
COL23A1Q86Y22 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL23A1Q86Y22 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL23A1Q86Y22 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC006504.5-208ENST00000588784 2401 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms