Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZFHX4Q86UP3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZFHX4Q86UP3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZFHX4Q86UP3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AL954722.1-201ENST00000431238 259 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 STK24P1-201ENST00000455035 1291 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AC018638.5-201ENST00000450885 754 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 RN7SL478P-201ENST00000584358 298 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 SALL4P5-201ENST00000419001 1760 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AP000533.1-201ENST00000456143 1177 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 ALG1L3P-201ENST00000503331 765 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AP002353.1-201ENST00000528257 1599 ntBASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.53□□□□□ -0.24
ZFHX4Q86UP3 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 AC139713.2-207ENST00000641556 1292 ntBASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZFHX4Q86UP3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 CICP12-201ENST00000455801 843 ntBASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 AL591122.2-201ENST00000624125 1853 ntBASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZFHX4Q86UP3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms