Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 MIR4259-201ENST00000584466 101 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 AC015656.1-201ENST00000624209 3578 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 AHCYP2-201ENST00000430630 1300 ntBASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 AC079781.5-202ENST00000641784 3743 ntBASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MIR6799-201ENST00000620297 69 ntBASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 MYO15B-237ENST00000642007 4893 ntBASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LYSMD3Q7Z3D4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AC009093.2-202ENST00000620513 2079 ntBASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AC099336.1-201ENST00000417053 1171 ntBASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms