Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 AP006294.1-201ENST00000415407 339 ntBASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 AP001889.1-201ENST00000525414 633 ntBASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 GNRHR2-203ENST00000581100 1187 ntBASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 AC145423.3-201ENST00000615987 467 ntBASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC134312.5-201ENST00000568031 1313 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CICP17-201ENST00000418553 2377 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 POM121L8P-201ENST00000417732 1281 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 POM121L9P-203ENST00000441984 1285 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 KRT18P25-201ENST00000508931 1278 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC003102.2-201ENST00000589195 1469 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 INTS4P1-203ENST00000641008 3683 ntBASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NHLRC1Q6VVB1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AL138725.1-201ENST00000407347 1314 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms