Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 MIR1908-201ENST00000410394 80 ntBASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AP006547.1-201ENST00000563435 692 ntBASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 RN7SL560P-201ENST00000577943 264 ntBASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AC138466.3-201ENST00000619983 221 ntBASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD3Q6PCD5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AL355994.2-201ENST00000447882 704 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC092658.1-201ENST00000505836 891 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 COX5BP1-201ENST00000507622 393 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC106820.3-201ENST00000561653 397 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC023090.2-201ENST00000625182 2110 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 INE2-201ENST00000630399 1874 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 AC107918.4-201ENST00000641966 3141 ntBASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms