Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.81■□□□□ 0.44
RFX7Q2KHR2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX7Q2KHR2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 VDAC1P1-201ENST00000439229 848 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AL035414.1-201ENST00000451327 857 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 UPF3AP2-201ENST00000457924 1132 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 TUBB8P8-201ENST00000458717 1058 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC106794.1-201ENST00000506935 792 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC005740.2-201ENST00000511085 419 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC024681.1-201ENST00000521917 487 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AF254983.2-201ENST00000612331 135 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 LINC02228-204ENST00000642115 2962 ntBASIC17.8■□□□□ 0.44
RFX7Q2KHR2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RFX7Q2KHR2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 KLF2P1-201ENST00000447438 1042 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AL160314.3-201ENST00000556041 767 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms