Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AP002414.2-201ENST00000591780 3365 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC018629.1-201ENST00000623381 1736 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 KRT18P46-201ENST00000435568 1279 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 ERP29P1-201ENST00000442902 706 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 GNG10P1-201ENST00000452289 199 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 RN7SL846P-201ENST00000467429 292 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 RN7SL23P-201ENST00000484055 275 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AC068831.5-201ENST00000557387 328 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AC007250.1-201ENST00000608934 338 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AC084364.1-201ENST00000551967 1556 ntBASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RSPO4Q2I0M5 AL513523.2-202ENST00000427283 2040 ntBASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 RN7SKP230-201ENST00000365642 335 ntBASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 CICP12-201ENST00000455801 843 ntBASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms